STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL3ST4Galactose-3-O-sulfotransferase 4. (448 aa)    
Predicted Functional Partners:
LRRC25
Uncharacterized protein.
      
 0.609
H3AKD6_LATCH
SH3 domain-containing protein.
      
 0.564
INPP5D
Inositol polyphosphate-5-phosphatase D.
      
 0.554
GCNT4
Glucosaminyl (N-acetyl) transferase 4.
      
 0.474
TAFA5
TAFA chemokine like family member 5.
      
 0.465
RAB7B
RAB7B, member RAS oncogene family.
      
 0.426
H3BGP7_LATCH
Uncharacterized protein.
      
 0.424
NEU4
Neuraminidase 4.
      
 0.420
TINAGL1
Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family.
      
 0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.