STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102362470Kruppel-like factor 17. (428 aa)    
Predicted Functional Partners:
DAW1
Dynein assembly factor with WD repeats 1.
      
 0.540
DND1
DND microRNA-mediated repression inhibitor 1.
      
 0.540
LOC102362664
POU domain protein.
    
 0.513
HUWE1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
 
 0.512
ITPRID2
ITPR interacting domain containing 2.
      
 0.499
SLC17A5
Solute carrier family 17 member 5.
      
 0.470
BIRC6
Baculoviral IAP repeat containing 6.
    
 0.461
RPS27A
Ribosomal protein S27a.
    
  0.441
RAB14
RAB14, member RAS oncogene family.
    
 0.419
COL9A3
Collagen type IX alpha 3 chain.
    
 0.401
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.