STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX25Sorting nexin 25. (620 aa)    
Predicted Functional Partners:
SNX14
Sorting nexin 14.
   
 
0.563
SNX27
Sorting nexin 27.
   
  
 0.489
ANKRD10
Ankyrin repeat domain 10.
    
 
 0.477
DCXR
Dicarbonyl and L-xylulose reductase.
      
 0.437
PMS1
PMS1 homolog 1, mismatch repair system component.
   
  
 0.435
RAB33A
RAB33A, member RAS oncogene family.
     
 0.429
RAPGEF2
Rap guanine nucleotide exchange factor 2.
      
 0.429
H3ANY8_LATCH
Ig-like domain-containing protein; Belongs to the MHC class I family.
      
 0.429
SNX17
Sorting nexin 17.
      
 0.426
RNMT
mRNA cap guanine-N7 methyltransferase.
      
 0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.