Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3A8Y0_LATCHCA domain-containing protein. (166 aa)    
Predicted Functional Partners:
CDH23
Uncharacterized protein.
 
    
0.915
H3AMW8_LATCH
Uncharacterized protein.
 
     
0.900
H3AUU3_LATCH
Cadherin-related 23.
 
     
0.900
USH1C
USH1 protein network component harmonin.
   
 
 0.813
PCDH15
Protocadherin related 15.
   
 0.776
H3ANB1_LATCH
Uncharacterized protein.
   
 0.776
H3B989_LATCH
Uncharacterized protein.
   
 0.776
DCHS1
Uncharacterized protein.
 
     
0.699
JUP
Junction plakoglobin.
    
 0.606
CTNNB1
Catenin beta 1.
    
 0.606
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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