STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFSF13BTNF superfamily member 13b; Belongs to the tumor necrosis factor family. (122 aa)    
Predicted Functional Partners:
LOC102358329
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
  
  
 
0.901
CD40LG
CD40 ligand; Belongs to the tumor necrosis factor family.
   
 
 0.832
TNFSF11
TNF superfamily member 11; Belongs to the tumor necrosis factor family.
   
 0.768
TNFSF12
TNF superfamily member 12; Belongs to the tumor necrosis factor family.
   
 0.755
LTBR
Lymphotoxin beta receptor.
   
 
 0.720
CD40
TNFR-Cys domain-containing protein.
   
 
 0.697
MAP3K14
Mitogen-activated protein kinase kinase kinase 14.
     
 0.685
H2ZX70_LATCH
Uncharacterized protein.
    
 
 0.677
H3A3U7_LATCH
Uncharacterized protein.
    
 
 0.677
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.662
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.