Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM110CFamily with sequence similarity 110 member C. (363 aa)    
Predicted Functional Partners:
LOC102361960
Uncharacterized protein.
      
 0.798
LMOD2
Leiomodin 2.
      
 0.733
RBP7
Retinol binding protein 7; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.659
LOC102359959
ZnMc domain-containing protein.
      
 0.658
LOC102360231
ZnMc domain-containing protein.
      
 0.658
LOC102360492
ZnMc domain-containing protein.
      
 0.658
LOC102362853
Si:ch73-362m14.4.
      
 0.597
LOC102364878
PRKG1_interact domain-containing protein.
      
 0.597
PALM2AKAP2
PALM2-AKAP2 fusion.
      
 0.480
LRRC10
Uncharacterized protein.
      
 0.426
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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