STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STK35Serine/threonine kinase 35. (237 aa)    
Predicted Functional Partners:
BECN1
Beclin 1, autophagy related.
    
 0.874
PIK3R4
Phosphoinositide-3-kinase regulatory subunit 4.
    
 0.856
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.856
ATG13
Autophagy related 13.
   
 0.842
ATG101
Autophagy related 101.
    
 0.809
ATG14
Autophagy related 14.
    
 0.775
RB1CC1
RB1-inducible coiled-coil 1.
    
 0.760
H3AMM0_LATCH
ATG11 domain-containing protein.
    
 0.760
ATG3
Autophagy-related protein 3.
   
 
 0.736
ATG12
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 
 0.728
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.