Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3A984_LATCHUncharacterized protein. (365 aa)    
Predicted Functional Partners:
H3AI86_LATCH
Uncharacterized protein.
 
     0.943
TBCD
Tubulin folding cofactor D.
 
     0.932
TBCC
Tubulin folding cofactor C.
    
 0.897
TBCE
CAP-Gly domain-containing protein.
    
 0.887
H3A466_LATCH
ADP-ribosylation factor-like 2; Belongs to the small GTPase superfamily. Arf family.
    
 0.885
TBCB
Tubulin folding cofactor B.
    
 0.855
FN3K
Fructosamine 3 kinase; Belongs to the fructosamine kinase family.
 
  
 0.831
TBCA
Tubulin-specific chaperone A; Belongs to the TBCA family.
    
 0.768
PFDN4
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.
    
 
 0.753
MAD1L1
Mitotic arrest deficient 1 like 1.
   
 
 0.729
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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