STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAPBPLTAP binding protein like. (448 aa)    
Predicted Functional Partners:
MVB12B
Multivesicular body subunit 12B.
      
 0.615
RPA2
Replication protein A2.
    
 0.599
H2ZRX3_LATCH
MHC_I-like_Ag-recog domain-containing protein; Belongs to the MHC class I family.
    
 0.473
H2ZVF6_LATCH
Ig-like domain-containing protein; Belongs to the MHC class I family.
    
 0.473
LOC102350052
MHC_I-like_Ag-recog domain-containing protein.
    
 0.473
LOC102360381
Uncharacterized protein.
     
 0.422
CALR3
Calreticulin.
     
 0.422
H2ZWA0_LATCH
Uncharacterized protein.
    
 0.411
STN1
CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication.
    
 0.411
SASS6
SAS-6 centriolar assembly protein.
    
 0.411
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.