STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A9A7_LATCHGLTSCR1 domain-containing protein. (1448 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.822
LOC102345465
Uncharacterized protein.
   
 
  0.572
H3AN32_LATCH
Uncharacterized protein.
   
 
  0.572
BCL7C
Uncharacterized protein.
    
 
 0.544
PBRM1
Polybromo 1.
   
 
 0.511
GLE1
GLE1 RNA export mediator.
    
 0.495
BRD9
Bromodomain containing 9.
    
 
 0.482
BRD7
Bromodomain containing 7.
    
 
 0.482
ARID2
AT-rich interaction domain 2.
   
 
 0.473
SS18L1
SS18L1 subunit of BAF chromatin remodeling complex.
    
 
 0.471
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.