STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102362196Ig-like domain-containing protein. (206 aa)    
Predicted Functional Partners:
CD40
TNFR-Cys domain-containing protein.
   
  
 0.623
CCR7
C-C motif chemokine receptor 7; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.578
LTA
Lymphotoxin alpha.
   
  
 0.532
IL10
Interleukin 10.
      
 0.485
H3ANY8_LATCH
Ig-like domain-containing protein; Belongs to the MHC class I family.
   
  
 0.461
IL6
Uncharacterized protein.
   
  
 0.452
H3AI21_LATCH
C-type lectin domain-containing protein.
   
  
 0.448
CD40LG
CD40 ligand; Belongs to the tumor necrosis factor family.
   
  
 0.442
CD68
Uncharacterized protein.
   
  
 0.440
LY75
Uncharacterized protein.
      
 0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.