STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCF2ATP-binding cassette, sub-family F (GCN20), member 2b. (533 aa)    
Predicted Functional Partners:
ABCE1
ATP binding cassette subfamily E member 1.
   
 
 0.990
MRPL20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.880
MRPL27
Mitochondrial ribosomal protein L27.
  
 
 0.865
RPL35
Ribosomal protein L35.
   
 
 0.858
MRPL33
Mitochondrial ribosomal protein L33.
   
 
 0.853
RPL23A
Ribosomal protein L23a.
   
 
 0.850
RPL11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.845
RPS18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.839
EIF5B
Eukaryotic translation initiation factor 5B.
  
 
 0.839
MRPL21
Mitochondrial ribosomal protein L21.
  
   0.834
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.