Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLITRK4SLIT and NTRK like family member 4. (833 aa)    
Predicted Functional Partners:
PTPRS
Protein tyrosine phosphatase receptor type S.
    
  0.927
GBE1
1,4-alpha-glucan branching enzyme 1.
     
 0.791
HTR1F
5-hydroxytryptamine (serotonin) receptor 1Fb.
      
 0.641
HTR1E
5-hydroxytryptamine receptor 1E.
      
 0.531
DRD3
Dopamine receptor D3; Belongs to the G-protein coupled receptor 1 family.
      
 0.517
CAPN7
Calpain 7; Belongs to the peptidase C2 family.
    
 
 0.491
PCDH12
Protocadherin 12.
     
 0.475
TIMM17B
Translocase of inner mitochondrial membrane 17B.
      
 0.473
SYTL5
Synaptotagmin like 5.
      
 0.470
LRR1
Leucine rich repeat protein 1.
      
 0.467
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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