STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL22A1VWFA domain-containing protein. (212 aa)    
Predicted Functional Partners:
COL9A1
LAM_G_DOMAIN domain-containing protein.
 
  
 0.919
LOC102351167
Zmp:0000000760.
 
  
 0.917
H3AEE8_LATCH
Uncharacterized protein.
 
  
 0.907
WDR90
WD repeat domain 90.
   
  0.880
COL23A1
Uncharacterized protein.
 
  
 0.807
ARID4A
AT-rich interaction domain 4A.
    
 0.796
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.774
H2ZVD4_LATCH
Uncharacterized protein.
 
  
 0.756
TUBB3
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the tubulin family.
    
 0.713
TUBB1
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.713
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.