STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIN9Lin-9 DREAM MuvB core complex component. (530 aa)    
Predicted Functional Partners:
MYBL2
MYB proto-oncogene like 2.
    
 0.975
RBBP7
WD_REPEATS_REGION domain-containing protein.
    
 0.948
LOC102347269
Retinoblastoma binding protein 4, like.
    
 0.948
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.948
TESMIN
Testis expressed metallothionein like protein.
   
 0.945
LIN54
Lin-54 DREAM MuvB core complex component.
   
 0.945
RBL2
RB transcriptional corepressor like 2.
   
 0.892
RB1
Uncharacterized protein.
   
 0.892
RBL1
RB transcriptional corepressor like 1.
   
 0.892
TMEM147
Transmembrane protein 147.
    
 0.865
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.