Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102347758F-BAR domain-containing protein. (205 aa)    
Predicted Functional Partners:
FCHSD2
Uncharacterized protein.
 
     0.931
ITSN2
Intersectin 2.
   
 0.768
GAS7
Growth arrest specific 7.
    
 0.573
H3AJ45_LATCH
Uncharacterized protein.
   
 0.555
ITSN1
Intersectin 1 (SH3 domain protein).
   
 0.555
LOC102357229
WASP like actin nucleation promoting factor a.
   
 0.549
WAS
Uncharacterized protein.
   
 0.549
WASL
WASP like actin nucleation promoting factor.
   
 0.549
LOC102346266
Uncharacterized protein.
   
 0.549
NCKIPSD
NCK interacting protein with SH3 domain.
    
 
 0.531
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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