STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAGAPT cell activation RhoGTPase activating protein. (711 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
   
 0.618
RIPOR3
RIPOR family member 3.
   
  
 0.600
LOC102349977
Uncharacterized protein.
   
  
 0.568
SASH3
SAM and SH3 domain containing 3.
   
  
 0.566
LCP1
Lymphocyte cytosolic protein 1.
   
  
 0.539
IRF2BPL
Interferon regulatory factor 2 binding protein like.
      
 0.537
LOC102348524
Uncharacterized protein.
   
 0.505
LOC102350273
Uncharacterized protein.
   
 0.505
RHOA
Uncharacterized protein.
   
 0.505
RHOC
Ras homolog family member Cb.
   
 0.505
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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