STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPB2Carboxypeptidase B2. (426 aa)    
Predicted Functional Partners:
F2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
   
 
 0.762
CPE
Carboxypeptidase E.
     
 0.725
SERPIND1
Serpin family D member 1; Belongs to the serpin family.
   
 
 0.706
SERPINC1
Serpin family C member 1; Belongs to the serpin family.
   
 
 0.696
ALG11
ALG11 alpha-1,2-mannosyltransferase.
   
  
 0.692
C5
Complement C5.
   
 0.684
PLG
Plasminogen; Belongs to the peptidase S1 family. Plasminogen subfamily.
   
 
 0.662
CHST10
Carbohydrate sulfotransferase.
      
 0.659
SERPINF2
Serpin family F member 2; Belongs to the serpin family.
   
 
 0.653
AMBP
Alpha-1-microglobulin/bikunin precursor.
   
  
 0.637
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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