Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102366063PID domain-containing protein. (489 aa)    
Predicted Functional Partners:
TBC1D1
TBC1 domain family member 1.
 
      0.899
H3A0S8_LATCH
Uncharacterized protein.
 
      0.899
EVI5L
Ecotropic viral integration site 5 like.
 
      0.865
TBC1D16
TBC1 domain family member 16.
      
 0.779
CARD14
Caspase recruitment domain family member 14.
      
 0.741
ARHGAP17
Rho GTPase activating protein 17.
      
 0.732
DGKE
Diacylglycerol kinase.
      
 0.719
YWHAZ
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
  0.625
ERAP1
Aminopeptidase.
     
 0.560
LNPEP
Leucyl and cystinyl aminopeptidase.
     
 0.560
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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