Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAHCC1BAH domain and coiled-coil containing 1. (2549 aa)    
Predicted Functional Partners:
SINHCAF
SIN3-HDAC complex associated factor.
    
   0.952
ING2
Inhibitor of growth protein.
    
 
 0.944
CTU1
Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.
   
   0.783
LOC102363998
SIN3-HDAC complex associated factor, like.
    
   0.775
SAP30
Sin3A associated protein 30.
    
   0.747
SAP30L
SAP30 like.
    
   0.747
ING1
Inhibitor of growth protein.
    
 
 0.706
MIER1
MIER1 transcriptional regulator.
    
 
 0.669
H3B919_LATCH
IQ motif containing E.
      
 0.627
MIER2
MIER family member 2.
    
 
 0.612
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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