Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CIDECCell death inducing DFFA like effector c. (249 aa)    
Predicted Functional Partners:
TSPAN33
Tetraspanin 33; Belongs to the tetraspanin (TM4SF) family.
      
 0.728
CCDC186
Coiled-coil domain containing 186.
      
 0.728
POLD2
DNA polymerase delta 2, accessory subunit.
      
 0.724
CIDEA
Cell death inducing DFFA like effector a.
    
  0.690
C1QTNF1
C1q and TNF related 1.
      
 0.658
LOC102355168
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
      
 0.658
LOC102360115
IFI30 lysosomal thiol reductase.
      
 0.652
EXO1
Exonuclease 1.
      
 0.651
FBLN5
Fibulin 5.
      
 0.650
BFSP2
Beaded filament structural protein 2; Belongs to the intermediate filament family.
      
 0.593
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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