STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMP2Lysosomal associated membrane protein 2. (416 aa)    
Predicted Functional Partners:
LAMP1
Lysosomal associated membrane protein 1.
  
 
0.985
CD63
Tetraspanin.
    
 0.920
EEA1
Early endosome antigen 1.
      
 0.713
BECN1
Beclin 1, autophagy related.
      
 0.685
FASTKD2
FAST kinase domains 2.
      
 0.657
RAB24
RAB24, member RAS oncogene family.
   
  
 0.611
SNCA
Gamma-synuclein; Belongs to the synuclein family.
   
 
 0.591
SQSTM1
Sequestosome 1.
    
 
 0.574
PLLP
Plasmolipin.
      
 0.547
DCP2
Decapping mRNA 2.
      
 0.540
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.