STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPSB2SplA/ryanodine receptor domain and SOCS box containing 2. (248 aa)    
Predicted Functional Partners:
ELOC
Elongin C; Belongs to the SKP1 family.
    
 0.848
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.702
LOC102354372
SAM domain-containing protein.
      
 0.670
RPP38
Ribonuclease P/MRP subunit p38.
      
 0.668
TBCEL
Tubulin folding cofactor E-like b.
      
 0.668
MYCBP2
MYC binding protein 2.
    
 
 0.655
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
 0.623
CUL1
Cullin 1; Belongs to the cullin family.
   
 0.575
ABCB4
ATP binding cassette subfamily B member 4.
      
 0.540
CROT
Carnitine O-octanoyltransferase.
      
 0.538
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.