STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPKHeterogeneous nuclear ribonucleoprotein K. (442 aa)    
Predicted Functional Partners:
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.949
SRSF1
Serine and arginine rich splicing factor 1a.
   
 0.923
DESI1
Desumoylating isopeptidase 1.
    
   0.923
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.915
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.914
HNRNPC
RRM domain-containing protein.
   
 0.911
HNRNPA1
Heterogeneous nuclear ribonucleoprotein A1b.
   
 0.890
CNBP
CCHC-type zinc finger, nucleic acid binding protein b.
   
  
 0.860
TRA2B
Transformer 2 beta homolog.
   
 0.850
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
   
 
 0.847
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.