STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTSHCathepsin H; Belongs to the peptidase C1 family. (329 aa)    
Predicted Functional Partners:
BIRC2
Baculoviral IAP repeat containing 2.
     
 0.655
LOC102346472
Uncharacterized protein.
     
 0.653
BIRC5
Baculoviral IAP repeat containing 5.
     
 0.653
CTSD
Cathepsin D; Belongs to the peptidase A1 family.
   
 0.641
LOC102355307
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.641
CTSB
Cathepsin B; Belongs to the peptidase C1 family.
  
0.605
NCKAP1
NCK associated protein 1.
   
  
 0.580
CTSZ
Cathepsin Z; Belongs to the peptidase C1 family.
   
0.572
ANPEP
Aminopeptidase.
   
  
 0.565
CD74
CD74 molecule.
   
 0.556
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.