Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP3GTP binding protein 3, mitochondrial. (522 aa)    
Predicted Functional Partners:
MTO1
Mitochondrial tRNA translation optimization 1.
 
 0.980
ERGIC2
ERGIC and golgi 2.
  
 0.899
LOC102363236
Uncharacterized protein.
  
 0.899
ERGIC1
Endoplasmic reticulum-golgi intermediate compartment 1.
  
 0.899
ERGIC3
ERGIC and golgi 3.
  
 0.899
TRMU
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
  
 0.875
GTPBP8
GTP binding protein 8 (putative).
    
 
 0.831
H3B002_LATCH
C1q and TNF related 9.
      
 0.802
GTSE1
GTSE1_N domain-containing protein.
  
 0.797
MRPL21
Mitochondrial ribosomal protein L21.
  
 
 0.784
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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