STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A9U3_LATCHPMSR domain-containing protein. (121 aa)    
Predicted Functional Partners:
LOC102354290
Uncharacterized protein.
  
 0.878
LOC102347712
Thioredoxin; Belongs to the thioredoxin family.
  
 0.871
M3XI97_LATCH
Thioredoxin domain-containing protein.
  
 0.844
TXN2
Thioredoxin 2.
   
 0.841
MSRB2
Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.
  
 
 0.798
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
   
 0.756
MSRB1
Methionine sulfoxide reductase B1.
  
 
 0.749
GLRX2
Glutaredoxin 2.
  
 
 0.668
LOC102347122
Zgc:152951.
  
 
 0.633
LOC102359383
DUF547 domain-containing protein.
  
 
 0.633
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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