STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A9U4_LATCHUncharacterized protein. (122 aa)    
Predicted Functional Partners:
DYNLRB2
Dynein light chain roadblock.
  
 0.820
DYNC2LI1
Dynein cytoplasmic 2 light intermediate chain 1.
   
 0.641
DNAL4
Dynein light chain.
    
 0.560
DYNLL1
Dynein light chain.
    
 0.560
IFT52
Intraflagellar transport 52.
     
 0.536
DYNLT3
Dynein light chain Tctex-type 3.
    
 
0.519
DYNLT1
Dynein light chain Tctex-type 1.
    
 
 0.519
LOC102362356
Uncharacterized protein.
    
 
 0.519
IFT88
Intraflagellar transport 88.
   
 
 0.492
IFT80
Intraflagellar transport 80.
     
 0.491
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.