STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A9W0_LATCHAAA domain-containing protein. (747 aa)    
Predicted Functional Partners:
PHB
Prohibitin.
   
 0.910
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
 
 0.853
TIMMDC1
Translocase of inner mitochondrial membrane domain containing 1.
   
   0.848
PHB2
Prohibitin.
   
 0.827
LOC102349562
Prohibitin.
   
 0.827
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
  
 
0.812
MRPL27
Mitochondrial ribosomal protein L27.
  
 
 0.786
MRPL19
Mitochondrial ribosomal protein L19.
  
 
 0.784
MRPL13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.784
MRPL15
Mitochondrial ribosomal protein L15.
   
 
 0.782
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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