STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLXNA1Plexin A1. (1387 aa)    
Predicted Functional Partners:
RND1
Rho family GTPase 1.
    
 0.802
NRP1
Neuropilin; Belongs to the neuropilin family.
    
 0.767
SEMA3E
Semaphorin 3E; Belongs to the semaphorin family.
    
 0.702
SEMA6A
Semaphorin 6A; Belongs to the semaphorin family.
    
 0.702
RRAS
RAS related.
    
 0.628
NAT8L
N-acetyltransferase 8 like.
      
 0.607
H3A6T5_LATCH
N-acetyltransferase domain-containing protein.
      
 0.607
PPTC7
Protein phosphatase; Belongs to the PP2C family.
      
 0.607
LOC102363082
Protein phosphatase; Belongs to the PP2C family.
      
 0.607
SEMA4A
Sema domain-containing protein; Belongs to the semaphorin family.
    
 0.605
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.