STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPHB6EPH receptor B6. (974 aa)    
Predicted Functional Partners:
EFNA5
Ephrin A5; Belongs to the ephrin family.
   
 0.798
EFNB2
Ephrin B2; Belongs to the ephrin family.
   
 0.744
EFNB1
Ephrin B1; Belongs to the ephrin family.
   
 0.722
ITSN2
Intersectin 2.
   
 0.704
EFNA2
Ephrin A2; Belongs to the ephrin family.
   
 0.589
TRRAP
Transformation/transcription domain-associated protein.
   
 
 0.587
H3AJ45_LATCH
Uncharacterized protein.
    
 0.568
ITSN1
Intersectin 1 (SH3 domain protein).
    
 0.568
EFNA3
Ephrin-A3b; Belongs to the ephrin family.
   
 0.558
ERBB3
Protein kinase domain-containing protein.
    
0.540
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.