STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNH8Uncharacterized protein. (1032 aa)    
Predicted Functional Partners:
FKBP9
Peptidylprolyl isomerase.
   
  
 0.780
FKBP14
Peptidylprolyl isomerase.
   
  
 0.731
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
    
 0.704
KCNAB2
Potassium voltage-gated channel subfamily A regulatory beta subunit 2.
    
 0.622
ZIC4
Zic family member 4.
   
  
 0.583
GABRA5
Gamma-aminobutyric acid type A receptor alpha5 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.482
KCNG1
Potassium voltage-gated channel modifier subfamily G member 1; Belongs to the potassium channel family.
   
 
 0.476
KCNF1
Potassium voltage-gated channel modifier subfamily F member 1; Belongs to the potassium channel family.
   
 
 0.470
SLITRK1
SLIT and NTRK like family member 1.
      
 0.459
NTRK2
Tyrosine-protein kinase receptor.
    
 
 0.435
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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