Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSR2Signal sequence receptor subunit 2. (137 aa)    
Predicted Functional Partners:
SSR4
Signal sequence receptor subunit 4.
   
 0.999
SSR3
Signal sequence receptor subunit 3.
   
 0.999
SSR1
Signal sequence receptor subunit 1.
   
 0.999
LOC102349329
Uncharacterized protein.
   
 0.979
DAD1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]
   
 
 0.900
CAGE1
Uncharacterized protein.
   
 0.899
LOC102367070
Uncharacterized protein.
   
 0.899
KRTCAP2
Keratinocyte associated protein 2.
   
 
 0.886
SEC61A1
SEC61 translocon alpha 1 subunit; Belongs to the SecY/SEC61-alpha family.
   
 0.877
SEC61A2
SEC61 translocon alpha 2 subunit.
   
 0.877
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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