Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3AA36_LATCHUncharacterized protein. (307 aa)    
Predicted Functional Partners:
H3A3J7_LATCH
Uncharacterized protein.
  
     0.492
H3A043_LATCH
Uncharacterized protein.
  
     0.489
H3B9G5_LATCH
Uncharacterized protein.
  
 
   0.477
H2ZVM8_LATCH
Uncharacterized protein.
  
     0.474
H2ZSV6_LATCH
Uncharacterized protein.
  
     0.462
H3B6K8_LATCH
Uncharacterized protein.
  
     0.428
H3A590_LATCH
Uncharacterized protein.
  
     0.410
AASDH
Aminoadipate-semialdehyde dehydrogenase.
  
 
 0.409
H3A0R3_LATCH
Uncharacterized protein.
  
     0.405
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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