Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LEXMUncharacterized protein. (417 aa)    
Predicted Functional Partners:
NIT1
Nitrilase 1.
      
 0.810
BIRC2
Baculoviral IAP repeat containing 2.
      
 0.598
ZNF385C
Zinc finger protein 385C.
      
 0.595
SEL1L3
SEL1L family member 3.
      
 0.595
LEMD2
LEM domain containing 2.
      
 0.516
LEMD3
LEM domain containing 3.
      
 0.514
ANKLE2
Ankyrin repeat and LEM domain containing 2.
      
 0.471
UBASH3A
Ubiquitin associated and SH3 domain containing A.
      
 0.469
SNX22
Sorting nexin 22.
      
 0.467
ITSN2
Intersectin 2.
     
 0.463
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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