STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3AA69_LATCHPeptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (327 aa)    
Predicted Functional Partners:
H3AS35_LATCH
Uncharacterized protein.
 
  
  0.598
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.544
H2ZWZ3_LATCH
Uncharacterized protein.
 
  
  0.456
H3AZ39_LATCH
Uncharacterized protein.
 
  
  0.451
WDR90
WD repeat domain 90.
    
 0.436
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.