STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3AA79_LATCHUncharacterized protein. (98 aa)    
Predicted Functional Partners:
ASPM
Abnormal spindle microtubule assembly.
   
   0.576
KIF11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.533
TTK
TTK protein kinase.
   
    0.533
ZCWPW2
Uncharacterized protein.
   
  
 0.533
H3A0V9_LATCH
DUF5595 domain-containing protein.
   
    0.523
ESPL1
Extra spindle pole bodies like 1, separase.
   
  
 0.504
CEP55
Centrosomal protein 55.
   
    0.483
HCCS
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
      
 0.459
H2ZZ70_LATCH
Nucleolar and spindle associated protein 1.
   
    0.452
LOC102360813
SAM domain-containing protein.
   
  
 0.440
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.