Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3AA83_LATCHIg-like domain-containing protein. (267 aa)    
Predicted Functional Partners:
CD74
CD74 molecule.
   
 0.980
CFAP54
Cilia and flagella associated protein 54.
      
 0.811
H3AJ79_LATCH
Ig-like domain-containing protein.
   
  0.722
CHST14
Carbohydrate sulfotransferase.
     
 0.709
H3AVH0_LATCH
Uncharacterized protein.
   
 
  0.693
H2ZTM7_LATCH
Ig-like domain-containing protein.
  
 
0.566
H3A5G2_LATCH
Ribosomal protein S14.
   
 0.566
RPS14
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.566
H2ZYC5_LATCH
Ig-like domain-containing protein.
  
 
0.557
ETV5
ETS variant 5.
      
 0.526
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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