Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLB1Galactosidase beta 1; Belongs to the glycosyl hydrolase 35 family. (649 aa)    
Predicted Functional Partners:
NEU1
Neuraminidase 1.
  
 0.949
GUSB
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.780
H3ANP6_LATCH
Uncharacterized protein; Belongs to the peptidase S10 family.
   
 0.750
LOC102367606
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.750
CTSA
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.750
NEU4
Neuraminidase 4.
     
 0.724
GM2A
GM2 ganglioside activator.
     
 0.701
FUCA1
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
 
  
 0.695
LOC102361487
Alpha-galactosidase.
  
  
 0.642
LOC102366389
Alpha-galactosidase.
  
  
 0.642
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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