STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35F5Solute carrier family 35 member F5. (487 aa)    
Predicted Functional Partners:
SLC35G2
Solute carrier family 35 member G2.
      
 0.554
TMX3
Thioredoxin related transmembrane protein 3.
     
 0.479
STOML2
Stomatin like 2.
      
 0.437
RAB7A
RAB7A, member RAS oncogene family.
 
      0.435
SLC39A13
Solute carrier family 39 member 13.
   
  
 0.429
SLC35B4
Solute carrier family 35 member B4.
      
 0.426
SLC22A15
Solute carrier family 22 member 15.
    
 
 0.421
LOC102347438
Solute carrier family 22 member 15.
    
 
 0.421
H3AFN9_LATCH
Uncharacterized protein.
      
 0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.