STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3ACH5_LATCHUncharacterized protein. (455 aa)    
Predicted Functional Partners:
TFDP2
Transcription factor.
   
 0.766
TFDP1
Transcription factor.
   
 0.766
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.738
MGA
MAX dimerization protein MGA.
    
 0.715
RBL2
RB transcriptional corepressor like 2.
   
 0.687
RB1
Uncharacterized protein.
   
 0.687
RBL1
RB transcriptional corepressor like 1.
   
 0.687
RNF2
Ring finger protein 2.
    
 0.670
RING1
Ring finger protein 1.
    
 0.670
MAX
MYC associated factor X.
    
 0.664
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.