STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMO3LIM domain only 3. (76 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.820
LDB2
LIM domain binding 2.
    
 0.820
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 0.743
H3A5U9_LATCH
LIM domain only 3.
 
     0.661
DBX1
Developing brain homeobox 1.
    
 
 0.622
GATA1
GATA binding protein 1b.
    
 0.604
PROX1
Prospero homeobox 1.
      
 0.575
GATA2
GATA binding protein 2.
    
 0.570
GATA3
GATA binding protein 3.
    
 0.562
CBFB
Core-binding factor subunit beta.
    
  0.547
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.