STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMTR2Cap methyltransferase 2. (767 aa)    
Predicted Functional Partners:
RNMT
mRNA cap guanine-N7 methyltransferase.
      
 0.685
COG4
Component of oligomeric golgi complex 4.
      
 0.613
DXO
Decapping exoribonuclease.
      
 0.554
GPATCH2
G-patch domain containing 2.
      
 0.553
TRMT44
tRNA methyltransferase 44 homolog.
      
 0.446
H2ZZC6_LATCH
Sm domain-containing protein.
    
   0.444
H2ZX26_LATCH
Uncharacterized protein.
      
 0.420
EXOSC4
Exosome component 4.
      
 0.420
FAM161B
FAM161 centrosomal protein B.
      
 0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.