STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3ADH6_LATCHDUF659 domain-containing protein. (143 aa)    
Predicted Functional Partners:
MEAF6
MYST/Esa1 associated factor 6.
    
 0.762
ARID4A
AT-rich interaction domain 4A.
   
 0.700
DMAP1
DNA methyltransferase 1 associated protein 1.
   
 0.621
H3BCP3_LATCH
Uncharacterized protein.
    
 0.614
TRRAP
Transformation/transcription domain-associated protein.
   
 0.605
LOC102351641
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.605
EPC2
Enhancer of polycomb homolog.
    
 0.575
EPC1
Enhancer of polycomb homolog.
    
 0.575
SIN3B
SIN3 transcription regulator family member B.
   
 
 0.516
SIN3A
SIN3 transcription regulator family member A.
   
 
 0.516
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.