STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTALymphotoxin alpha. (166 aa)    
Predicted Functional Partners:
TNFRSF1B
TNF receptor superfamily member 1B.
   
 0.999
TRADD
Death domain-containing protein.
    
 0.991
LOC102356355
TNFR-Cys domain-containing protein.
    
 0.968
TBKBP1
TBK1 binding protein 1.
    
 
 0.929
H3BAI7_LATCH
TNFR-Cys domain-containing protein.
   
 0.928
LOC102360064
Uncharacterized protein.
   
 0.928
LOC102360854
Uncharacterized protein.
   
 0.928
AZI2
5-azacytidine induced 2.
    
   0.923
TNFRSF14
Uncharacterized protein.
     
  0.900
TAB3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.867
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.