STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BROXBRO1 domain and CAAX motif containing. (411 aa)    
Predicted Functional Partners:
CHMP5
Charged multivesicular body protein 5.
    
 0.909
CHMP4B
Charged multivesicular body protein 4B.
   
 0.750
CHMP4C
Uncharacterized protein.
   
 0.750
CHMP6
Charged multivesicular body protein 6.
    
 0.725
CHMP4A
Charged multivesicular body protein 4A.
   
 0.644
STAM2
Signal transducing adaptor molecule 2.
   
 
 0.644
MDP1
Si:dkeyp-27c8.2.
    
 0.570
TM9SF1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.548
STAM
Signal transducing adaptor molecule.
   
 
 0.545
NOP53
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
      
 0.537
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.