STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A6Solute carrier family 39 member 6. (742 aa)    
Predicted Functional Partners:
SLC39A9
Solute carrier family 39 member 9.
    
 
 0.797
CD3E
CD3e molecule.
      
 0.611
SLC1A1
Amino acid transporter.
  
 
 0.571
CD36
CD36 molecule; Belongs to the CD36 family.
      
 0.558
SLC30A4
Solute carrier family 30 member 4.
   
 0.517
RNF165
Ring finger protein 165.
      
 0.512
SLC30A7
Solute carrier family 30 member 7.
  
 0.473
SLC30A6
Solute carrier family 30 member 6.
  
 0.473
SLC30A5
Solute carrier family 30 member 5.
  
 0.472
TFIP11
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
      
 0.446
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.