STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFF1AF4/FMR2 family member 1. (1215 aa)    
Predicted Functional Partners:
CDK9
Cyclin dependent kinase 9; Belongs to the protein kinase superfamily.
    
 0.971
CCNT1
Cyclin T1; Belongs to the cyclin family.
   
 0.921
EAF1
ELL associated factor 1.
    
 0.905
CCNT2
Cyclin T2; Belongs to the cyclin family.
   
 0.886
ELL2
Elongation factor for RNA polymerase II 2.
   
 0.830
ELL
Elongation factor for RNA polymerase II.
   
 0.830
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.829
ELL3
Uncharacterized protein.
   
 0.813
MLLT3
Uncharacterized protein.
    
 0.808
LOC102359646
MLLT3 super elongation complex subunit.
    
 0.808
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.