STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lach-UB-05-2Ig-like domain-containing protein. (338 aa)    
Predicted Functional Partners:
CALR3
Calreticulin.
   
 
  0.703
H3AVH0_LATCH
Uncharacterized protein.
    
  0.693
LOC106706091
Uncharacterized protein.
     
  0.680
PDIA3
Protein disulfide-isomerase.
     
  0.680
H3AJ79_LATCH
Ig-like domain-containing protein.
     
  0.650
ISYNA1
Inositol-3-phosphate synthase 1.
      
 0.573
MMP21
Matrix metallopeptidase 21; Belongs to the peptidase M10A family.
      
 0.499
LOC102348367
ZnMc domain-containing protein; Belongs to the peptidase M10A family.
      
 0.499
CDC42EP3
CDC42 effector protein 3.
      
 0.495
H2ZWA0_LATCH
Uncharacterized protein.
   
 0.423
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.