STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLPPATP-dependent Clp protease proteolytic subunit. (247 aa)    
Predicted Functional Partners:
CLPX
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
 
 0.999
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.993
LONP1
Lon protease homolog; Belongs to the peptidase S16 family.
  
 
 0.921
HSPE1
Heat shock protein family E (Hsp10) member 1; Belongs to the GroES chaperonin family.
 
 
 0.912
NDUFS8
NADH:ubiquinone oxidoreductase core subunit S8.
   
 
 0.878
TUFM
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
  
 0.875
NDUFS3
NADH:ubiquinone oxidoreductase core subunit S3.
   
 
 0.862
MRPS11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
  
 
 0.854
HSPD1
Heat shock protein family D (Hsp60) member 1; Belongs to the chaperonin (HSP60) family.
 
 
 0.839
MRPL36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
  
 0.832
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.